A scalable approach to streamline tractography clustering

نویسندگان

  • E. Visser
  • E. Nijhuis
  • M. P. Zwiers
چکیده

Introduction Diffusion tractography has become an important method for assessing white matter (WM) structure. Depending on the application, the large number of streamlines typically produced by the tracking algorithm may make the dataset difficult to handle. As there will be many streamlines corresponding to each anatomical WM tract, it is often advantageous to group them into clusters in which all streamlines correspond to the same anatomical tract. In group studies, identifying tracts across subjects may be an additional objective. A common problem with clustering methods is their ability to scale, especially if data from multiple subjects is analysed. We present an approach based on repeated clustering of subsets that is conceptually transparent and that scales well to large tractography datasets and subject groups.

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Simultaneous Manifold Learning and Clustering: Grouping White Matter Fiber Tracts Using a Volumetric White Matter Atlas

We propose a new clustering algorithm. This algorithm performs clustering and manifold learning simultaneously by using a graph-theoretical approach to manifold learning. We apply this algorithm in order to cluster white matter fiber tracts obtained from Diffusion Tensor MRI (DT-MRI) through streamline tractography. Our algorithm is able perform clustering of these fiber tracts incorporating in...

متن کامل

Automatic Population HARDI White Matter Tract Clustering by Label Fusion of Multiple Tract Atlases

Automatic labeling of white matter fibres in diffusion-weighted brain MRI is vital for comparing brain integrity and connectivity across populations, but is challenging. Whole brain tractography generates a vast set of fibres throughout the brain, but it is hard to cluster them into anatomically meaningful tracts, due to wide individual variations in the trajectory and shape of white matter pat...

متن کامل

Automatic clustering of white matter fibers in brain diffusion MRI with an application to genetics

To understand factors that affect brain connectivity and integrity, it is beneficial to automatically cluster white matter (WM) fibers into anatomically recognizable tracts. Whole brain tractography, based on diffusion-weighted MRI, generates vast sets of fibers throughout the brain; clustering them into consistent and recognizable bundles can be difficult as there are wide individual variation...

متن کامل

A global approach to diffusion tensor neighborhood tractography

Introduction: Neighborhood tractography offers the potential to improve the reliability and reproducibility of automated white matter pathway extraction and associated measurements of connectivity and tract integrity. Neighborhood tractography frameworks have been proposed for local tractography methods, particularly those based on streamline, or probabilistic streamline algorithms [1,2]. In th...

متن کامل

Fiber tractography using machine learning

We present a fiber tractography approach based on a random forest classification and voting process, guiding each step of the streamline progression by directly processing raw diffusion-weighted signal intensities. For comparison to the state-of-the-art, i.e. tractography pipelines that rely on mathematical modeling, we performed a quantitative and qualitative evaluation with multiple phantom a...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:

دوره   شماره 

صفحات  -

تاریخ انتشار 2009